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truB [2018-10-22 09:05:11]
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truB [2018-10-22 09:05:11]

tRNA pseudouridine 5S synthase
locus
BSU16660
pI
6.65
mw
34.05 kDa
protein length
309 aa Sequence Blast
gene length
927 bp Sequence Blast
function
tRNA modification
product
tRNA pseudouridine 5S synthase
essential
no
synonyms
ylxN, ymxF
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.3|Protein synthesis, modification and degradation] → [category|SW 3.3.1|Translation] → [category|SW 3.3.1.8|tRNA modification and maturation]

    • Gene

    Coordinates
    1,736,886 → 1,737,815

    The protein

    Catalyzed reaction/ biological activity

  • tRNA uridine = tRNA pseudouridine (according to Swiss-Prot)

    • Protein family

  • Type 1 subfamily (according to Swiss-Prot)

    • Biological materials

    Mutant

  • BKE16660 (Δ[gene|425FC9847D10A6FA9725D6523CD3213C57B371BE|truB]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE16660 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTGCCTTTCACTCCTTC, downstream forward: _UP4_CAATAGAAAAAAGGTGACCG
  • BKK16660 (Δ[gene|425FC9847D10A6FA9725D6523CD3213C57B371BE|truB]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK16660 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTGCCTTTCACTCCTTC, downstream forward: _UP4_CAATAGAAAAAAGGTGACCG

    • References

  • 24371284,7489483